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T

TextFileBufferInput - Class in uni.bielefeld.cmg.sparkhit.io

Returns an object for buffering input files.

TextFileBufferInput() - Constructor for class uni.bielefeld.cmg.sparkhit.io.TextFileBufferInput

A constructor that construct an object of TextFileBufferInput class.

TextFileBufferOutput - Class in uni.bielefeld.cmg.sparkhit.io

Returns an object for buffering output files.

TextFileBufferOutput() - Constructor for class uni.bielefeld.cmg.sparkhit.io.TextFileBufferOutput

A constructor that construct an object of TextFileBufferOutput class.

threads - Variable in class uni.bielefeld.cmg.sparkhit.util.DefaultParam

threeNtBits - Variable in class uni.bielefeld.cmg.sparkhit.struct.AlignmentParameter

title - Variable in class uni.bielefeld.cmg.sparkhit.reference.RefStructBuilder

tool - Variable in class uni.bielefeld.cmg.sparkhit.util.DefaultParam

toolDepend - Variable in class uni.bielefeld.cmg.sparkhit.util.DefaultParam

toolParam - Variable in class uni.bielefeld.cmg.sparkhit.util.DefaultParam

totalLength - Variable in class uni.bielefeld.cmg.sparkhit.pipeline.BatchAlignPipe

totalLength - Variable in class uni.bielefeld.cmg.sparkhit.reference.RefStructBuilder

totalNum - Variable in class uni.bielefeld.cmg.sparkhit.pipeline.BatchAlignPipe

totalNum - Variable in class uni.bielefeld.cmg.sparkhit.reference.RefStructBuilder

twoNtBits - Variable in class uni.bielefeld.cmg.sparkhit.struct.AlignmentParameter

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